User:Michael Strong/H1N1/PB1

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Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of PB1 Protein, 39 sequences

gi|227977138_A/Texas/04/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237511919_A/Mexico/4486/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227977130_A/Texas/05/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229299523_A/Texas/04/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227977150_A/California/07/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227831817_A/California/07/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227831787_A/California/06/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227831772_A/California/05/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|227809826_A/California/04/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229396425_A/California/08/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229396483_A/New_York/19/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229484071_A/Mexico/InDRE448     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229484073_A/Canada-ON/RV152     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229535801_A/Texas/09/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229535973_A/Texas/08/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229536068_A/Texas/07/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229535788_A/New_York/22/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229536137_A/New_York/09/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229536079_A/Indiana/09/2009     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229535820_A/California/14/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229598889_A/Texas/15/2009       MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229783412_A/New_York/1682/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892786_A/Mexico/InDRE411     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892790_A/Canada-ON/RV152     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892788_A/Canada-ON/RV152     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892792_A/Canada-AB/RV153     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237511921_A/Mexico/4604/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237511927_A/Mexico/4603/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237511925_A/Mexico/4482/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237511923_A/Mexico/4108/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229487525_A/Canada-NS/RV153     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892794_A/Canada-NS/RV153     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229892784_A/Canada-NS/RV153     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229783391_A/New_York/1669/2     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHRYS 50 gi|229536040_A/Arizona/02/2009     MDVNPTLLFLKTPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229536026_A/Minnesota/02/20     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229396439_A/New_York/10/200     MDVNPTLLFVKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|229396395_A/New_York/18/200     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 gi|237624323_A/swine/Alberta/O     MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS 50 *********:* ***********************************:**

gi|227977138_A/Texas/04/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237511919_A/Mexico/4486/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227977130_A/Texas/05/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229299523_A/Texas/04/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227977150_A/California/07/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227831817_A/California/07/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227831787_A/California/06/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227831772_A/California/05/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|227809826_A/California/04/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229396425_A/California/08/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229396483_A/New_York/19/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229484071_A/Mexico/InDRE448     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229484073_A/Canada-ON/RV152     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229535801_A/Texas/09/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229535973_A/Texas/08/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229536068_A/Texas/07/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229535788_A/New_York/22/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229536137_A/New_York/09/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229536079_A/Indiana/09/2009     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229535820_A/California/14/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229598889_A/Texas/15/2009       EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229783412_A/New_York/1682/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892786_A/Mexico/InDRE411     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892790_A/Canada-ON/RV152     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892788_A/Canada-ON/RV152     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892792_A/Canada-AB/RV153     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237511921_A/Mexico/4604/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237511927_A/Mexico/4603/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237511925_A/Mexico/4482/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237511923_A/Mexico/4108/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229487525_A/Canada-NS/RV153     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892794_A/Canada-NS/RV153     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229892784_A/Canada-NS/RV153     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229783391_A/New_York/1669/2     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229536040_A/Arizona/02/2009     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229536026_A/Minnesota/02/20     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229396439_A/New_York/10/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|229396395_A/New_York/18/200     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 gi|237624323_A/swine/Alberta/O     EKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHP 100 **************************************************

gi|227977138_A/Texas/04/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237511919_A/Mexico/4486/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227977130_A/Texas/05/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229299523_A/Texas/04/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227977150_A/California/07/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227831817_A/California/07/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227831787_A/California/06/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227831772_A/California/05/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|227809826_A/California/04/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229396425_A/California/08/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229396483_A/New_York/19/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229484071_A/Mexico/InDRE448     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229484073_A/Canada-ON/RV152     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229535801_A/Texas/09/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229535973_A/Texas/08/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229536068_A/Texas/07/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229535788_A/New_York/22/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229536137_A/New_York/09/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229536079_A/Indiana/09/2009     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229535820_A/California/14/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229598889_A/Texas/15/2009       GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229783412_A/New_York/1682/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892786_A/Mexico/InDRE411     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892790_A/Canada-ON/RV152     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892788_A/Canada-ON/RV152     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892792_A/Canada-AB/RV153     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237511921_A/Mexico/4604/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237511927_A/Mexico/4603/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237511925_A/Mexico/4482/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237511923_A/Mexico/4108/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229487525_A/Canada-NS/RV153     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892794_A/Canada-NS/RV153     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229892784_A/Canada-NS/RV153     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229783391_A/New_York/1669/2     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229536040_A/Arizona/02/2009     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229536026_A/Minnesota/02/20     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229396439_A/New_York/10/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|229396395_A/New_York/18/200     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 gi|237624323_A/swine/Alberta/O     GIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVF 150 **************************************************

gi|227977138_A/Texas/04/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237511919_A/Mexico/4486/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227977130_A/Texas/05/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229299523_A/Texas/04/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227977150_A/California/07/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227831817_A/California/07/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227831787_A/California/06/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227831772_A/California/05/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|227809826_A/California/04/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229396425_A/California/08/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229396483_A/New_York/19/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229484071_A/Mexico/InDRE448     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229484073_A/Canada-ON/RV152     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229535801_A/Texas/09/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229535973_A/Texas/08/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229536068_A/Texas/07/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229535788_A/New_York/22/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229536137_A/New_York/09/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229536079_A/Indiana/09/2009     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229535820_A/California/14/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229598889_A/Texas/15/2009       RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229783412_A/New_York/1682/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892786_A/Mexico/InDRE411     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892790_A/Canada-ON/RV152     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892788_A/Canada-ON/RV152     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892792_A/Canada-AB/RV153     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237511921_A/Mexico/4604/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237511927_A/Mexico/4603/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237511925_A/Mexico/4482/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237511923_A/Mexico/4108/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229487525_A/Canada-NS/RV153     RSNGLTVNESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892794_A/Canada-NS/RV153     RSNGLTVNESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229892784_A/Canada-NS/RV153     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229783391_A/New_York/1669/2     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229536040_A/Arizona/02/2009     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229536026_A/Minnesota/02/20     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229396439_A/New_York/10/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|229396395_A/New_York/18/200     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 gi|237624323_A/swine/Alberta/O     RSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMV 200 ******.*******************************************

gi|227977138_A/Texas/04/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237511919_A/Mexico/4486/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227977130_A/Texas/05/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229299523_A/Texas/04/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227977150_A/California/07/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227831817_A/California/07/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227831787_A/California/06/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227831772_A/California/05/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|227809826_A/California/04/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229396425_A/California/08/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229396483_A/New_York/19/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229484071_A/Mexico/InDRE448     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229484073_A/Canada-ON/RV152     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229535801_A/Texas/09/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229535973_A/Texas/08/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229536068_A/Texas/07/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229535788_A/New_York/22/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229536137_A/New_York/09/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229536079_A/Indiana/09/2009     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229535820_A/California/14/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229598889_A/Texas/15/2009       TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229783412_A/New_York/1682/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892786_A/Mexico/InDRE411     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892790_A/Canada-ON/RV152     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892788_A/Canada-ON/RV152     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892792_A/Canada-AB/RV153     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237511921_A/Mexico/4604/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237511927_A/Mexico/4603/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237511925_A/Mexico/4482/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237511923_A/Mexico/4108/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229487525_A/Canada-NS/RV153     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892794_A/Canada-NS/RV153     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229892784_A/Canada-NS/RV153     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229783391_A/New_York/1669/2     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229536040_A/Arizona/02/2009     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229536026_A/Minnesota/02/20     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229396439_A/New_York/10/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|229396395_A/New_York/18/200     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 gi|237624323_A/swine/Alberta/O     TQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRG 250 **************************************************

gi|227977138_A/Texas/04/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237511919_A/Mexico/4486/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227977130_A/Texas/05/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229299523_A/Texas/04/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227977150_A/California/07/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227831817_A/California/07/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227831787_A/California/06/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227831772_A/California/05/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|227809826_A/California/04/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229396425_A/California/08/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229396483_A/New_York/19/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229484071_A/Mexico/InDRE448     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229484073_A/Canada-ON/RV152     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229535801_A/Texas/09/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229535973_A/Texas/08/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229536068_A/Texas/07/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229535788_A/New_York/22/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229536137_A/New_York/09/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229536079_A/Indiana/09/2009     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229535820_A/California/14/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229598889_A/Texas/15/2009       FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229783412_A/New_York/1682/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892786_A/Mexico/InDRE411     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892790_A/Canada-ON/RV152     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892788_A/Canada-ON/RV152     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892792_A/Canada-AB/RV153     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237511921_A/Mexico/4604/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237511927_A/Mexico/4603/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237511925_A/Mexico/4482/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237511923_A/Mexico/4108/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229487525_A/Canada-NS/RV153     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892794_A/Canada-NS/RV153     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229892784_A/Canada-NS/RV153     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229783391_A/New_York/1669/2     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229536040_A/Arizona/02/2009     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229536026_A/Minnesota/02/20     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229396439_A/New_York/10/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|229396395_A/New_York/18/200     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 gi|237624323_A/swine/Alberta/O     FVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF 300 **************************************************

gi|227977138_A/Texas/04/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237511919_A/Mexico/4486/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227977130_A/Texas/05/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229299523_A/Texas/04/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227977150_A/California/07/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227831817_A/California/07/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227831787_A/California/06/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227831772_A/California/05/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|227809826_A/California/04/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229396425_A/California/08/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229396483_A/New_York/19/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229484071_A/Mexico/InDRE448     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229484073_A/Canada-ON/RV152     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229535801_A/Texas/09/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229535973_A/Texas/08/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229536068_A/Texas/07/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229535788_A/New_York/22/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229536137_A/New_York/09/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229536079_A/Indiana/09/2009     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229535820_A/California/14/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229598889_A/Texas/15/2009       TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229783412_A/New_York/1682/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892786_A/Mexico/InDRE411     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892790_A/Canada-ON/RV152     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892788_A/Canada-ON/RV152     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892792_A/Canada-AB/RV153     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237511921_A/Mexico/4604/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237511927_A/Mexico/4603/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237511925_A/Mexico/4482/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237511923_A/Mexico/4108/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229487525_A/Canada-NS/RV153     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892794_A/Canada-NS/RV153     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229892784_A/Canada-NS/RV153     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229783391_A/New_York/1669/2     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229536040_A/Arizona/02/2009     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229536026_A/Minnesota/02/20     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229396439_A/New_York/10/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|229396395_A/New_York/18/200     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 gi|237624323_A/swine/Alberta/O     TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMAR 350 **************************************************

gi|227977138_A/Texas/04/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237511919_A/Mexico/4486/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227977130_A/Texas/05/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229299523_A/Texas/04/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227977150_A/California/07/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227831817_A/California/07/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227831787_A/California/06/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227831772_A/California/05/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|227809826_A/California/04/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229396425_A/California/08/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229396483_A/New_York/19/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229484071_A/Mexico/InDRE448     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229484073_A/Canada-ON/RV152     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229535801_A/Texas/09/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229535973_A/Texas/08/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229536068_A/Texas/07/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229535788_A/New_York/22/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229536137_A/New_York/09/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229536079_A/Indiana/09/2009     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229535820_A/California/14/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229598889_A/Texas/15/2009       LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229783412_A/New_York/1682/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892786_A/Mexico/InDRE411     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892790_A/Canada-ON/RV152     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892788_A/Canada-ON/RV152     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892792_A/Canada-AB/RV153     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237511921_A/Mexico/4604/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237511927_A/Mexico/4603/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237511925_A/Mexico/4482/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237511923_A/Mexico/4108/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229487525_A/Canada-NS/RV153     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892794_A/Canada-NS/RV153     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229892784_A/Canada-NS/RV153     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229783391_A/New_York/1669/2     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229536040_A/Arizona/02/2009     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229536026_A/Minnesota/02/20     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIXPLLIDGT 400 gi|229396439_A/New_York/10/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|229396395_A/New_York/18/200     LGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 gi|237624323_A/swine/Alberta/O     LGKGYMFESKRMKIRTQIPGEMLASIDLKYFNESTKKKIEKIRPLLIDGT 400 *******************.********************** *******

gi|227977138_A/Texas/04/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237511919_A/Mexico/4486/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227977130_A/Texas/05/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229299523_A/Texas/04/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227977150_A/California/07/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227831817_A/California/07/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227831787_A/California/06/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227831772_A/California/05/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|227809826_A/California/04/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229396425_A/California/08/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229396483_A/New_York/19/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229484071_A/Mexico/InDRE448     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229484073_A/Canada-ON/RV152     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229535801_A/Texas/09/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229535973_A/Texas/08/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229536068_A/Texas/07/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229535788_A/New_York/22/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229536137_A/New_York/09/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229536079_A/Indiana/09/2009     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229535820_A/California/14/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229598889_A/Texas/15/2009       ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229783412_A/New_York/1682/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892786_A/Mexico/InDRE411     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892790_A/Canada-ON/RV152     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892788_A/Canada-ON/RV152     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892792_A/Canada-AB/RV153     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237511921_A/Mexico/4604/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237511927_A/Mexico/4603/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237511925_A/Mexico/4482/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237511923_A/Mexico/4108/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229487525_A/Canada-NS/RV153     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892794_A/Canada-NS/RV153     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229892784_A/Canada-NS/RV153     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229783391_A/New_York/1669/2     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229536040_A/Arizona/02/2009     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229536026_A/Minnesota/02/20     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229396439_A/New_York/10/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|229396395_A/New_York/18/200     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 gi|237624323_A/swine/Alberta/O     ASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALI 450 **************************************************

gi|227977138_A/Texas/04/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237511919_A/Mexico/4486/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227977130_A/Texas/05/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229299523_A/Texas/04/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227977150_A/California/07/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227831817_A/California/07/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227831787_A/California/06/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227831772_A/California/05/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|227809826_A/California/04/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229396425_A/California/08/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229396483_A/New_York/19/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229484071_A/Mexico/InDRE448     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229484073_A/Canada-ON/RV152     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229535801_A/Texas/09/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229535973_A/Texas/08/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229536068_A/Texas/07/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229535788_A/New_York/22/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229536137_A/New_York/09/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229536079_A/Indiana/09/2009     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229535820_A/California/14/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229598889_A/Texas/15/2009       VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229783412_A/New_York/1682/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892786_A/Mexico/InDRE411     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892790_A/Canada-ON/RV152     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892788_A/Canada-ON/RV152     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892792_A/Canada-AB/RV153     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237511921_A/Mexico/4604/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237511927_A/Mexico/4603/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237511925_A/Mexico/4482/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237511923_A/Mexico/4108/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229487525_A/Canada-NS/RV153     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892794_A/Canada-NS/RV153     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229892784_A/Canada-NS/RV153     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229783391_A/New_York/1669/2     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229536040_A/Arizona/02/2009     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229536026_A/Minnesota/02/20     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229396439_A/New_York/10/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|229396395_A/New_York/18/200     VNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 gi|237624323_A/swine/Alberta/O     VNAPNHEGIQAGVDRSYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYG 500 *************** **********************************

gi|227977138_A/Texas/04/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237511919_A/Mexico/4486/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227977130_A/Texas/05/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229299523_A/Texas/04/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227977150_A/California/07/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227831817_A/California/07/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227831787_A/California/06/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227831772_A/California/05/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|227809826_A/California/04/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229396425_A/California/08/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229396483_A/New_York/19/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229484071_A/Mexico/InDRE448     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229484073_A/Canada-ON/RV152     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229535801_A/Texas/09/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229535973_A/Texas/08/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229536068_A/Texas/07/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229535788_A/New_York/22/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229536137_A/New_York/09/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229536079_A/Indiana/09/2009     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229535820_A/California/14/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229598889_A/Texas/15/2009       FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229783412_A/New_York/1682/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892786_A/Mexico/InDRE411     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892790_A/Canada-ON/RV152     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892788_A/Canada-ON/RV152     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892792_A/Canada-AB/RV153     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237511921_A/Mexico/4604/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237511927_A/Mexico/4603/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237511925_A/Mexico/4482/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237511923_A/Mexico/4108/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229487525_A/Canada-NS/RV153     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892794_A/Canada-NS/RV153     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229892784_A/Canada-NS/RV153     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229783391_A/New_York/1669/2     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229536040_A/Arizona/02/2009     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229536026_A/Minnesota/02/20     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229396439_A/New_York/10/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|229396395_A/New_York/18/200     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 gi|237624323_A/swine/Alberta/O     FVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQL 550 **************************************************

gi|227977138_A/Texas/04/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237511919_A/Mexico/4486/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227977130_A/Texas/05/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229299523_A/Texas/04/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227977150_A/California/07/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227831817_A/California/07/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227831787_A/California/06/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227831772_A/California/05/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|227809826_A/California/04/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229396425_A/California/08/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229396483_A/New_York/19/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229484071_A/Mexico/InDRE448     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229484073_A/Canada-ON/RV152     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229535801_A/Texas/09/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229535973_A/Texas/08/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229536068_A/Texas/07/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229535788_A/New_York/22/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229536137_A/New_York/09/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229536079_A/Indiana/09/2009     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229535820_A/California/14/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229598889_A/Texas/15/2009       FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229783412_A/New_York/1682/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229892786_A/Mexico/InDRE411     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229892790_A/Canada-ON/RV152     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229892788_A/Canada-ON/RV152     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229892792_A/Canada-AB/RV153     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237511921_A/Mexico/4604/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237511927_A/Mexico/4603/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237511925_A/Mexico/4482/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237511923_A/Mexico/4108/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229487525_A/Canada-NS/RV153     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN 600 gi|229892794_A/Canada-NS/RV153     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN 600 gi|229892784_A/Canada-NS/RV153     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN 600 gi|229783391_A/New_York/1669/2     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229536040_A/Arizona/02/2009     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229536026_A/Minnesota/02/20     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229396439_A/New_York/10/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|229396395_A/New_York/18/200     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 gi|237624323_A/swine/Alberta/O     FIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN 600 ************************************.*************

gi|227977138_A/Texas/04/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237511919_A/Mexico/4486/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227977130_A/Texas/05/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229299523_A/Texas/04/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227977150_A/California/07/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227831817_A/California/07/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227831787_A/California/06/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227831772_A/California/05/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|227809826_A/California/04/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229396425_A/California/08/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229396483_A/New_York/19/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229484071_A/Mexico/InDRE448     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229484073_A/Canada-ON/RV152     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229535801_A/Texas/09/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229535973_A/Texas/08/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229536068_A/Texas/07/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229535788_A/New_York/22/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229536137_A/New_York/09/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229536079_A/Indiana/09/2009     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229535820_A/California/14/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229598889_A/Texas/15/2009       IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229783412_A/New_York/1682/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892786_A/Mexico/InDRE411     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892790_A/Canada-ON/RV152     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892788_A/Canada-ON/RV152     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892792_A/Canada-AB/RV153     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237511921_A/Mexico/4604/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237511927_A/Mexico/4603/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237511925_A/Mexico/4482/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237511923_A/Mexico/4108/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229487525_A/Canada-NS/RV153     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892794_A/Canada-NS/RV153     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229892784_A/Canada-NS/RV153     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVSNAVVMPAHG 650 gi|229783391_A/New_York/1669/2     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229536040_A/Arizona/02/2009     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229536026_A/Minnesota/02/20     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229396439_A/New_York/10/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|229396395_A/New_York/18/200     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHG 650 gi|237624323_A/swine/Alberta/O     IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVVPAHG 650 ****************************************.****:****

gi|227977138_A/Texas/04/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|237511919_A/Mexico/4486/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227977130_A/Texas/05/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229299523_A/Texas/04/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227977150_A/California/07/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227831817_A/California/07/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227831787_A/California/06/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227831772_A/California/05/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|227809826_A/California/04/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229396425_A/California/08/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229396483_A/New_York/19/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229484071_A/Mexico/InDRE448     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229484073_A/Canada-ON/RV152     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229535801_A/Texas/09/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229535973_A/Texas/08/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229536068_A/Texas/07/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229535788_A/New_York/22/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229536137_A/New_York/09/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229536079_A/Indiana/09/2009     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229535820_A/California/14/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229598889_A/Texas/15/2009       PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229783412_A/New_York/1682/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892786_A/Mexico/InDRE411     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892790_A/Canada-ON/RV152     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892788_A/Canada-ON/RV152     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892792_A/Canada-AB/RV153     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|237511921_A/Mexico/4604/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|237511927_A/Mexico/4603/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|237511925_A/Mexico/4482/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|237511923_A/Mexico/4108/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229487525_A/Canada-NS/RV153     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892794_A/Canada-NS/RV153     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229892784_A/Canada-NS/RV153     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229783391_A/New_York/1669/2     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229536040_A/Arizona/02/2009     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229536026_A/Minnesota/02/20     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229396439_A/New_York/10/200     PAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 gi|229396395_A/New_York/18/200     PAKSMEYDAVATTHSWIPKRNRSILNTNQRGILEDEQMYQKCCNLFEKFF 700 gi|237624323_A/swine/Alberta/O     PAKSMEYDAVATTHFWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFF 700 ************** ************.**********************

gi|227977138_A/Texas/04/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237511919_A/Mexico/4486/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227977130_A/Texas/05/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229299523_A/Texas/04/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227977150_A/California/07/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227831817_A/California/07/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227831787_A/California/06/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227831772_A/California/05/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|227809826_A/California/04/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229396425_A/California/08/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229396483_A/New_York/19/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229484071_A/Mexico/InDRE448     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229484073_A/Canada-ON/RV152     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229535801_A/Texas/09/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229535973_A/Texas/08/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229536068_A/Texas/07/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229535788_A/New_York/22/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229536137_A/New_York/09/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229536079_A/Indiana/09/2009     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229535820_A/California/14/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229598889_A/Texas/15/2009       PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229783412_A/New_York/1682/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892786_A/Mexico/InDRE411     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892790_A/Canada-ON/RV152     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892788_A/Canada-ON/RV152     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892792_A/Canada-AB/RV153     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237511921_A/Mexico/4604/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237511927_A/Mexico/4603/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237511925_A/Mexico/4482/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237511923_A/Mexico/4108/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229487525_A/Canada-NS/RV153     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892794_A/Canada-NS/RV153     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229892784_A/Canada-NS/RV153     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229783391_A/New_York/1669/2     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229536040_A/Arizona/02/2009     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229536026_A/Minnesota/02/20     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229396439_A/New_York/10/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|229396395_A/New_York/18/200     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 gi|237624323_A/swine/Alberta/O     PSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTI 750 **************************************************

gi|227977138_A/Texas/04/2009       EELRRQK 757 gi|237511919_A/Mexico/4486/200     --- gi|227977130_A/Texas/05/2009       EELRRQK 757 gi|229299523_A/Texas/04/2009       EELRRQK 757 gi|227977150_A/California/07/2     EELRRQK 757 gi|227831817_A/California/07/2     EELRRQK 757 gi|227831787_A/California/06/2     EELRRQK 757 gi|227831772_A/California/05/2     EELRRQK 757 gi|227809826_A/California/04/2     EELRRQK 757 gi|229396425_A/California/08/2     EELRRQK 757 gi|229396483_A/New_York/19/200     EELRRQK 757 gi|229484071_A/Mexico/InDRE448     EELRRQK 757 gi|229484073_A/Canada-ON/RV152     EELRRQK 757 gi|229535801_A/Texas/09/2009       EELRRQK 757 gi|229535973_A/Texas/08/2009       EELRRQK 757 gi|229536068_A/Texas/07/2009       EELRRQK 757 gi|229535788_A/New_York/22/200     EELRRQK 757 gi|229536137_A/New_York/09/200     EELRRQK 757 gi|229536079_A/Indiana/09/2009     EELRRQK 757 gi|229535820_A/California/14/2     EELRRQK 757 gi|229598889_A/Texas/15/2009       EELRRQK 757 gi|229783412_A/New_York/1682/2     EELRRQK 757 gi|229892786_A/Mexico/InDRE411     EELRRQK 757 gi|229892790_A/Canada-ON/RV152     EELRRQK 757 gi|229892788_A/Canada-ON/RV152     EELRRQK 757 gi|229892792_A/Canada-AB/RV153     EELRRQK 757 gi|237511921_A/Mexico/4604/200     EELRRQK 757 gi|237511927_A/Mexico/4603/200     EELRRQK 757 gi|237511925_A/Mexico/4482/200     EELRRQK 757 gi|237511923_A/Mexico/4108/200     EELRRQK 757 gi|229487525_A/Canada-NS/RV153     EELRRQK 757 gi|229892794_A/Canada-NS/RV153     EELRRQK 757 gi|229892784_A/Canada-NS/RV153     EELRRQK 757 gi|229783391_A/New_York/1669/2     EELRRQK 757 gi|229536040_A/Arizona/02/2009     EELRRQK 757 gi|229536026_A/Minnesota/02/20     EELRRQK 757 gi|229396439_A/New_York/10/200     EELRRQK 757 gi|229396395_A/New_York/18/200     EELRRQK 757 gi|237624323_A/swine/Alberta/O     EELRRQK 757

BLAST
>gb|AAO88267.1|AF342823_1 PB1 [Influenza A virus (A/Wisconsin/10/98 (H1N1))] Length=757

Score = 1575 bits (4077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 745/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAL87925.1|AF455727_1 polymerase subunit [Influenza A virus (A/Swine/Iowa/930/01(H1N2))] Length=757

Score = 1573 bits (4073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR++FESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIEFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABA46964.1| PB1 [Influenza A virus (A/swine/Minnesota/00395/2004(H3N1))] Length=757

Score = 1573 bits (4072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDE+MYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDERMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABP49379.1| polymerase PB1 [Influenza A virus (A/South Australia/11/2000(H3N2))] Length=757

Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG48024.1| polymerase PB1 [Influenza A virus (A/New York/727/1994(H3N2))] gb|ABG88473.1| polymerase PB1 [Influenza A virus (A/New York/736/1994(H3N2))] Length=757

Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG37282.1| polymerase PB1 [Influenza A virus (A/New York/665/1994(H3N2))] gb|ABG79982.1| polymerase PB1 [Influenza A virus (A/New York/661/1994(H3N2))] gb|ABK40664.1| polymerase PB1 [Influenza A virus (A/New York/681/1995(H3N2))] Length=757

Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAF76001.1|AF250130_1 polymerase subunit PB1 [influenza A virus (A/Swine/Indiana/9K035/99 (H1N2))] Length=757

Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR++KRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVDKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQ+KYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQRKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG47969.1| polymerase PB1 [Influenza A virus (A/New York/716/1994(H3N2))] gb|ABG88462.1| polymerase PB1 [Influenza A virus (A/New York/735/1994(H3N2))] Length=757

Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG26898.1| polymerase PB1 [Influenza A virus (A/New York/698/1995(H3N2))] gb|ABG26909.1| polymerase PB1 [Influenza A virus (A/New York/702/1995(H3N2))] gb|ABG37172.1| polymerase PB1 [Influenza A virus (A/New York/632/1996(H3N2))] 13 more sequence titles gb|ABG37249.1| polymerase PB1 [Influenza A virus (A/New York/658/1995(H3N2))] gb|ABG37260.1| polymerase PB1 [Influenza A virus (A/New York/659/1994(H3N2))] gb|ABG37293.1| polymerase PB1 [Influenza A virus (A/New York/669/1995(H3N2))] gb|ABG37315.1| polymerase PB1 [Influenza A virus (A/New York/672/1995(H3N2))] gb|ABG37337.1| polymerase PB1 [Influenza A virus (A/New York/679/1995(H3N2))] gb|ABG47881.1| polymerase PB1 [Influenza A virus (A/New York/684/1995(H3N2))] gb|ABG47914.1| polymerase PB1 [Influenza A virus (A/New York/689/1995(H3N2))] gb|ABG67176.1| polymerase PB1 [Influenza A virus (A/New York/670/1995(H3N2))] gb|ABG80015.1| polymerase PB1 [Influenza A virus (A/New York/666/1995(H3N2))] gb|ABG80059.1| polymerase PB1 [Influenza A virus (A/New York/691/1995(H3N2))] gb|ABG88363.1| polymerase PB1 [Influenza A virus (A/New York/673/1995(H3N2))] gb|ABG88374.1| polymerase PB1 [Influenza A virus (A/New York/683/1995(H3N2))] gb|ABG88396.1| polymerase PB1 [Influenza A virus (A/New York/690/1995(H3N2))] Length=757

Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABI20911.1| polymerase PB1 [Influenza A virus (A/New York/688/1994(H3N2))] Length=757

Score = 1571 bits (4069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIG+TVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGITVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG79993.1| polymerase PB1 [Influenza A virus (A/New York/663/1994(H3N2))] Length=757

Score = 1571 bits (4069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPE+CLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEICLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80237.1| polymerase PB1 [Influenza A virus (A/New York/521/1998(H3N2))] Length=757

Score = 1571 bits (4069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACE78124.1| polymerase PB1 [Influenza A virus (A/swine/Korea/CY10/2007(H3N2))] Length=757

Score = 1571 bits (4068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAE+LASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEVLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALI+NAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIINAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACD65218.1| polymerase PB1 [Influenza A virus (A/swine/Ohio/75004/04(H1N1))] Length=757

Score = 1571 bits (4068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRMNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 +MK+RTQIPAEMLASIDLKYFNE T+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  KMKLRTQIPAEMLASIDLKYFNEPTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMP+HGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPSHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80114.1| polymerase PB1 [Influenza A virus (A/New York/713/1994(H3N2))] Length=757

Score = 1571 bits (4068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFVKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG67187.1| polymerase PB1 [Influenza A virus (A/New York/675/1995(H3N2))] Length=757

Score = 1571 bits (4068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISS+VEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSLVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAC63409.1| PB1 polymerase subunit [Influenza A virus H3N2] gb|AAC63411.1| PB1 polymerase subunit [Influenza A virus H3N2] gb|AAC63412.1| PB1 polymerase subunit [Influenza A virus H3N2] 217 more sequence titles gb|AAC63453.1| PB1 polymerase subunit [Influenza A virus H3N2] gb|AAY46424.1| polymerase PB1 [Influenza A virus (A/New York/240/1998(H3N2))] gb|AAY46434.1| polymerase PB1 [Influenza A virus (A/New York/249/1998(H3N2))] gb|AAY64290.1| polymerase PB1 [Influenza A virus (A/New York/262/1999(H3N2))] gb|AAY64330.1| polymerase PB1 [Influenza A virus (A/New York/256/1998(H3N2))] gb|AAY64380.1| polymerase PB1 [Influenza A virus (A/New York/284/1999(H3N2))] gb|AAY64390.1| polymerase PB1 [Influenza A virus (A/New York/286/1999(H3N2))] gb|AAY98045.1| polymerase PB1 [Influenza A virus (A/New York/255/1999(H3N2))] gb|AAY98055.1| polymerase PB1 [Influenza A virus (A/New York/257/1999(H3N2))] gb|AAY98095.1| polymerase PB1 [Influenza A virus (A/New York/277/1999(H3N2))] gb|AAY98105.1| polymerase PB1 [Influenza A virus (A/New York/279/1999(H3N2))] gb|AAY98135.1| polymerase PB1 [Influenza A virus (A/New York/288/1999(H3N2))] gb|AAY98155.1| polymerase PB1 [Influenza A virus (A/New York/290/1999(H3N2))] gb|AAY98165.1| polymerase PB1 [Influenza A virus (A/New York/304/1998(H3N2))] gb|AAY98175.1| polymerase PB1 [Influenza A virus (A/New York/311/1999(H3N2))] gb|AAY98205.1| polymerase PB1 [Influenza A virus (A/New York/314/1999(H3N2))] gb|AAY98215.1| polymerase PB1 [Influenza A virus (A/New York/317/1999(H3N2))] gb|AAY98245.1| polymerase PB1 [Influenza A virus (A/New York/318/1999(H3N2))] gb|AAY98255.1| polymerase PB1 [Influenza A virus (A/New York/321/1999(H3N2))] gb|AAY98337.1| polymerase PB1 [Influenza A virus (A/New York/327/1999(H3N2))] gb|AAY98347.1| polymerase PB1 [Influenza A virus (A/New York/329/1999(H3N2))] gb|AAY98364.1| polymerase PB1 [Influenza A virus (A/New York/333/1999(H3N2))] gb|AAY98394.1| polymerase PB1 [Influenza A virus (A/New York/337/1999(H3N2))] gb|AAY98414.1| polymerase PB1 [Influenza A virus (A/New York/340/1999(H3N2))] gb|AAY98778.1| polymerase PB1 [Influenza A virus (A/New York/248/1999(H3N2))] gb|AAZ38492.1| polymerase PB1 [Influenza A virus (A/New York/331/1999(H3N2))] gb|AAZ38503.1| polymerase PB1 [Influenza A virus (A/New York/332/1999(H3N2))] gb|AAZ38569.1| polymerase PB1 [Influenza A virus (A/New York/260/1999(H3N2))] gb|AAZ74371.1| polymerase PB1 [Influenza A virus (A/New York/283/1999(H3N2))] gb|AAZ74394.1| polymerase PB1 [Influenza A virus (A/New York/254/1998(H3N2))] gb|AAZ74438.1| polymerase PB1 [Influenza A virus (A/New York/285/1999(H3N2))] gb|AAZ74570.1| polymerase PB1 [Influenza A virus (A/New York/347/1999(H3N2))] gb|AAZ74592.1| polymerase PB1 [Influenza A virus (A/New York/398/1999(H3N2))] gb|AAZ79568.1| polymerase PB1 [Influenza A virus (A/New York/325/1999(H3N2))] gb|AAZ79579.1| polymerase PB1 [Influenza A virus (A/New York/328/1998(H3N2))] gb|AAZ79590.1| polymerase PB1 [Influenza A virus (A/New York/330/1998(H3N2))] gb|AAZ83274.1| polymerase PB1 [Influenza A virus (A/New York/252/1999(H3N2))] gb|AAZ83285.1| polymerase PB1 [Influenza A virus (A/New York/261/1999(H3N2))] gb|AAZ83331.1| polymerase PB1 [Influenza A virus (A/New York/339/1999(H3N2))] gb|ABB02966.1| polymerase PB1 [Influenza A virus (A/New York/449/1999(H3N2))] gb|ABB02977.1| polymerase PB1 [Influenza A virus (A/New York/450/1999(H3N2))] gb|ABB02988.1| polymerase PB1 [Influenza A virus (A/New York/451/1999(H3N2))] gb|ABB02999.1| polymerase PB1 [Influenza A virus (A/New York/453/1999(H3N2))] gb|ABB03010.1| polymerase PB1 [Influenza A virus (A/New York/454/1999(H3N2))] gb|ABB03032.1| polymerase PB1 [Influenza A virus (A/New York/457/1999(H3N2))] gb|ABB03054.1| polymerase PB1 [Influenza A virus (A/New York/459/1999(H3N2))] gb|ABB04914.1| polymerase PB1 [Influenza A virus (A/Hong Kong/14/92(H3N2))] gb|ABB04969.1| polymerase PB1 [Influenza A virus (A/Nanchang/0074/94(H3N2))] gb|ABB46433.1| polymerase PB1 [Influenza A virus (A/New York/455/1999(H3N2))] gb|ABB53704.1| polymerase PB1 [Influenza A virus (A/New York/397/1999(H3N2))] gb|ABB60015.1| polymerase PB1 [Influenza A virus (A/New York/517/1998(H3N2))] gb|ABB79818.1| polymerase PB1 [Influenza A virus (A/Nanchang/A2/94(H3N2))] gb|ABB79976.1| polymerase PB1 [Influenza A virus (A/Nanchang/58/93(H3N2))] gb|ABB80156.1| polymerase PB1 [Influenza A virus (A/New York/501/1997(H3N2))] gb|ABB80226.1| polymerase PB1 [Influenza A virus (A/New York/528/1998(H3N2))] gb|ABB80649.1| polymerase PB1 [Influenza A virus (A/New York/532/1998(H3N2))] gb|ABB80669.1| polymerase PB1 [Influenza A virus (A/New York/533/1998(H3N2))] gb|ABB80712.1| polymerase PB1 [Influenza A virus (A/New York/545/1997(H3N2))] gb|ABC02307.1| polymerase PB1 [Influenza A virus (A/New York/538/1998(H3N2))] gb|ABC54676.1| polymerase PB1 [Influenza A virus (A/New York/326/1999(H3N2))] gb|ABC67880.1| polymerase PB1 [Influenza A virus (A/Canterbury/42/2000(H3N2))] gb|ABC68230.1| polymerase PB1 [Influenza A virus (A/Canterbury/39/2000(H3N2))] gb|ABC68241.1| polymerase PB1 [Influenza A virus (A/Nanchang/A1/94(H3N2))] gb|ABC84568.1| polymerase PB1 [Influenza A virus (A/Canterbury/88/2000(H3N2))] gb|ABC84579.1| polymerase PB1 [Influenza A virus (A/Canterbury/99/2000(H3N2))] gb|ABC85762.1| polymerase PB1 [Influenza A virus (A/Canterbury/73/2000(H3N2))] gb|ABC85784.1| polymerase PB1 [Influenza A virus (A/Canterbury/38/2000(H3N2))] gb|ABC85795.1| polymerase PB1 [Influenza A virus (A/Canterbury/17/2000(H3N2))] gb|ABD15589.1| polymerase PB1 [Influenza A virus (A/New York/529/1998(H3N2))] gb|ABD15688.1| polymerase PB1 [Influenza A virus (A/Canterbury/103/2000(H3N2))] gb|ABD15710.1| polymerase PB1 [Influenza A virus (A/Canterbury/89/2000(H3N2))] gb|ABD15732.1| polymerase PB1 [Influenza A virus (A/Canterbury/85/2000(H3N2))] gb|ABD15776.1| polymerase PB1 [Influenza A virus (A/Canterbury/71/2000(H3N2))] gb|ABD15787.1| polymerase PB1 [Influenza A virus (A/Canterbury/66/2000(H3N2))] gb|ABD15798.1| polymerase PB1 [Influenza A virus (A/Canterbury/68/2000(H3N2))] gb|ABD16300.1| polymerase PB1 [Influenza A virus (A/Canterbury/56/2000(H3N2))] gb|ABD60809.1| polymerase PB1 [Influenza A virus (A/Nanchang/12/93(H3N2))] gb|ABD61323.1| polymerase PB1 [Influenza A virus (A/Canterbury/87/2000(H3N2))] gb|ABD61389.1| polymerase PB1 [Influenza A virus (A/Canterbury/64/2000(H3N2))] gb|ABD61400.1| polymerase PB1 [Influenza A virus (A/Canterbury/67/2000(H3N2))] gb|ABD77628.1| polymerase PB1 [Influenza A virus (A/West Coast/32/2001(H3N2))] gb|ABD77639.1| polymerase PB1 [Influenza A virus (A/Canterbury/37/2001(H3N2))] gb|ABD77650.1| polymerase PB1 [Influenza A virus (A/Canterbury/44/2001(H3N2))] gb|ABD77661.1| polymerase PB1 [Influenza A virus (A/West Coast/55/2001(H3N2))] gb|ABD77760.1| polymerase PB1 [Influenza A virus (A/West Coast/28/2001(H3N2))] gb|ABD77771.1| polymerase PB1 [Influenza A virus (A/Canterbury/43/2001(H3N2))] gb|ABD77859.1| polymerase PB1 [Influenza A virus (A/New York/580/1996(H3N2))] gb|ABD77881.1| polymerase PB1 [Influenza A virus (A/New York/586/1996(H3N2))] gb|ABD77892.1| polymerase PB1 [Influenza A virus (A/New York/588/1996(H3N2))] gb|ABD77903.1| polymerase PB1 [Influenza A virus (A/New York/589/1996(H3N2))] gb|ABD77914.1| polymerase PB1 [Influenza A virus (A/New York/597/1997(H3N2))] gb|ABD78134.1| polymerase PB1 [Influenza A virus (A/New York/593/1996(H3N2))] gb|ABD94841.1| polymerase PB1 [Influenza A virus (A/New York/562/1996(H3N2))] gb|ABD94863.1| polymerase PB1 [Influenza A virus (A/New York/567/1996(H3N2))] gb|ABE13337.1| polymerase PB1 [Influenza A virus (A/New York/578/1996(H3N2))] gb|ABE13563.1| polymerase PB1 [Influenza A virus (A/New York/603/1996(H3N2))] gb|ABE13647.1| polymerase PB1 [Influenza A virus (A/New York/611/1995(H3N2))] gb|ABE13682.1| polymerase PB1 [Influenza A virus (A/New York/612/1995(H3N2))] gb|ABE13865.1| polymerase PB1 [Influenza A virus (A/New York/613/1996(H3N2))] gb|ABE14027.1| polymerase PB1 [Influenza A virus (A/New York/618/1995(H3N2))] gb|ABE14071.1| polymerase PB1 [Influenza A virus (A/New York/628/1995(H3N2))] gb|ABF47624.1| polymerase PB1 [Influenza A virus (A/New York/623/1995(H3N2))] gb|ABF47910.1| polymerase PB1 [Influenza A virus (A/Wellington/9/2000(H3N2))] gb|ABF82714.1| polymerase PB1 [Influenza A virus (A/New York/602/1996(H3N2))] gb|ABG26766.1| polymerase PB1 [Influenza A virus (A/New York/557/1996(H3N2))] gb|ABG26931.1| polymerase PB1 [Influenza A virus (A/New York/708/1994(H3N2))] gb|ABG37161.1| polymerase PB1 [Influenza A virus (A/New York/624/1996(H3N2))] gb|ABG37183.1| polymerase PB1 [Influenza A virus (A/New York/635/1996(H3N2))] gb|ABG37359.1| polymerase PB1 [Influenza A virus (A/New York/751/1993(H3N2))] gb|ABG47925.1| polymerase PB1 [Influenza A virus (A/New York/709/1994(H3N2))] gb|ABG47936.1| polymerase PB1 [Influenza A virus (A/New York/711/1994(H3N2))] gb|ABG47947.1| polymerase PB1 [Influenza A virus (A/New York/712/1993(H3N2))] gb|ABG47980.1| polymerase PB1 [Influenza A virus (A/New York/719/1994(H3N2))] gb|ABG48002.1| polymerase PB1 [Influenza A virus (A/New York/721/1994(H3N2))] gb|ABG48013.1| polymerase PB1 [Influenza A virus (A/New York/726/1994(H3N2))] gb|ABG48035.1| polymerase PB1 [Influenza A virus (A/New York/728/1994(H3N2))] gb|ABG48046.1| polymerase PB1 [Influenza A virus (A/New York/752/1993(H3N2))] gb|ABG48068.1| polymerase PB1 [Influenza A virus (A/Waikato/5/2000(H3N2))] gb|ABG48079.1| polymerase PB1 [Influenza A virus (A/Waikato/1/2001(H3N2))] gb|ABG48310.1| polymerase PB1 [Influenza A virus (A/New York/759/1993(H3N2))] gb|ABG48321.1| polymerase PB1 [Influenza A virus (A/New York/760/1993(H3N2))] gb|ABG48343.1| polymerase PB1 [Influenza A virus (A/New York/762/1993(H3N2))] gb|ABG48354.1| polymerase PB1 [Influenza A virus (A/New York/763/1993(H3N2))] gb|ABG48376.1| polymerase PB1 [Influenza A virus (A/New York/765/1993(H3N2))] gb|ABG67154.1| polymerase PB1 [Influenza A virus (A/New York/598/1996(H3N2))] gb|ABG67220.1| polymerase PB1 [Influenza A virus (A/New York/722/1994(H3N2))] gb|ABG67231.1| polymerase PB1 [Influenza A virus (A/New York/729/1994(H3N2))] gb|ABG67242.1| polymerase PB1 [Influenza A virus (A/New York/730/1994(H3N2))] gb|ABG67253.1| polymerase PB1 [Influenza A virus (A/New York/734/1994(H3N2))] gb|ABG79971.1| polymerase PB1 [Influenza A virus (A/New York/655/1994(H3N2))] gb|ABG80081.1| polymerase PB1 [Influenza A virus (A/New York/705/1994(H3N2))] gb|ABG80125.1| polymerase PB1 [Influenza A virus (A/New York/714/1994(H3N2))] gb|ABG80136.1| polymerase PB1 [Influenza A virus (A/New York/746/1994(H3N2))] gb|ABG80147.1| polymerase PB1 [Influenza A virus (A/New York/747/1994(H3N2))] gb|ABG80158.1| polymerase PB1 [Influenza A virus (A/New York/748/1994(H3N2))] gb|ABG80213.1| polymerase PB1 [Influenza A virus (A/Waikato/4/2000(H3N2))] gb|ABG80367.1| polymerase PB1 [Influenza A virus (A/New York/770/1993(H3N2))] gb|ABG80378.1| polymerase PB1 [Influenza A virus (A/New York/771/1993(H3N2))] gb|ABG80400.1| polymerase PB1 [Influenza A virus (A/New York/777/1993(H3N2))] gb|ABG80422.1| polymerase PB1 [Influenza A virus (A/New York/779/1993(H3N2))] gb|ABG80433.1| polymerase PB1 [Influenza A virus (A/New York/786/1993(H3N2))] gb|ABG88297.1| polymerase PB1 [Influenza A virus (A/New York/554/1996(H3N2))] gb|ABG88418.1| polymerase PB1 [Influenza A virus (A/New York/718/1994(H3N2))] gb|ABG88429.1| polymerase PB1 [Influenza A virus (A/New York/723/1994(H3N2))] gb|ABG88440.1| polymerase PB1 [Influenza A virus (A/New York/724/1994(H3N2))] gb|ABG88451.1| polymerase PB1 [Influenza A virus (A/New York/725/1994(H3N2))] gb|ABG88484.1| polymerase PB1 [Influenza A virus (A/New York/738/1994(H3N2))] gb|ABG88495.1| polymerase PB1 [Influenza A virus (A/New York/739/1994(H3N2))] gb|ABG88517.1| polymerase PB1 [Influenza A virus (A/New York/741/1994(H3N2))] gb|ABG88528.1| polymerase PB1 [Influenza A virus (A/New York/750/1994(H3N2))] gb|ABG88539.1| polymerase PB1 [Influenza A virus (A/New York/753/1994(H3N2))] gb|ABG88594.1| polymerase PB1 [Influenza A virus (A/Waikato/20/2000(H3N2))] gb|ABG88792.1| polymerase PB1 [Influenza A virus (A/New York/785/1993(H3N2))] gb|ABI20922.1| polymerase PB1 [Influenza A virus (A/New York/731/1994(H3N2))] gb|ABI20933.1| polymerase PB1 [Influenza A virus (A/New York/742/1994(H3N2))] gb|ABI20966.1| polymerase PB1 [Influenza A virus (A/New York/745/1994(H3N2))] gb|ABI20999.1| polymerase PB1 [Influenza A virus (A/Waikato/17/2000(H3N2))] gb|ABI21296.1| polymerase PB1 [Influenza A virus (A/New York/772/1993(H3N2))] gb|ABI21318.1| polymerase PB1 [Influenza A virus (A/New York/774/1993(H3N2))] gb|ABI21329.1| polymerase PB1 [Influenza A virus (A/New York/776/1993(H3N2))] gb|ABI21340.1| polymerase PB1 [Influenza A virus (A/New York/780/1993(H3N2))] gb|ABI21351.1| polymerase PB1 [Influenza A virus (A/New York/784/1993(H3N2))] gb|ABI21395.1| polymerase PB1 [Influenza A virus (A/New York/790/1993(H3N2))] gb|ABI21417.1| polymerase PB1 [Influenza A virus (A/New York/792/1993(H3N2))] gb|ABI21428.1| polymerase PB1 [Influenza A virus (A/New York/794/1993(H3N2))] gb|ABI21439.1| polymerase PB1 [Influenza A virus (A/New York/795/1993(H3N2))] gb|ABI21472.1| polymerase PB1 [Influenza A virus (A/New York/799/1993(H3N2))] gb|ABI30397.1| polymerase PB1 [Influenza A virus (A/New York/717/1994(H3N2))] gb|ABI30408.1| polymerase PB1 [Influenza A virus (A/Wellington/26/2000(H3N2))] gb|ABI30873.1| polymerase PB1 [Influenza A virus (A/New York/796/1993(H3N2))] gb|ABI92332.1| polymerase PB1 [Influenza A virus (A/New York/737/1994(H3N2))] gb|ABI92475.1| polymerase PB1 [Influenza A virus (A/Western Australia/2/2000(H3N2))] gb|ABI92486.1| polymerase PB1 [Influenza A virus (A/Western Australia/3/2000(H3N2))] gb|ABI92497.1| polymerase PB1 [Influenza A virus (A/Western Australia/8/2000(H3N2))] gb|ABI92508.1| polymerase PB1 [Influenza A virus (A/Western Australia/11/2000(H3N2))] gb|ABI93080.1| polymerase PB1 [Influenza A virus (A/New South Wales/25/2000(H3N2))] gb|ABI93091.1| polymerase PB1 [Influenza A virus (A/New South Wales/27/2000(H3N2))] gb|ABI93102.1| polymerase PB1 [Influenza A virus (A/New South Wales/28/2000(H3N2))] gb|ABI93113.1| polymerase PB1 [Influenza A virus (A/New South Wales/29/2000(H3N2))] gb|ABI93124.1| polymerase PB1 [Influenza A virus (A/New South Wales/36/2000(H3N2))] gb|ABI95313.1| polymerase PB1 [Influenza A virus (A/New South Wales/33/2000(H3N2))] gb|ABJ09115.1| polymerase PB1 [Influenza A virus (A/Canterbury/75/2000(H3N2))] gb|ABJ09148.1| polymerase PB1 [Influenza A virus (A/New York/706/1993(H3N2))] gb|ABJ09225.1| polymerase PB1 [Influenza A virus (A/New York/800/1993(H3N2))] gb|ABJ09346.1| polymerase PB1 [Influenza A virus (A/New South Wales/32/2000(H3N2))] gb|ABJ09368.1| polymerase PB1 [Influenza A virus (A/New South Wales/35/2000(H3N2))] gb|ABJ16705.1| polymerase PB1 [Influenza A virus (A/South Australia/59/2000(H3N2))] gb|ABJ16749.1| polymerase PB1 [Influenza A virus (A/South Australia/66/2000(H3N2))] gb|ABJ16760.1| polymerase PB1 [Influenza A virus (A/South Australia/67/2000(H3N2))] gb|ABJ16771.1| polymerase PB1 [Influenza A virus (A/South Australia/68/2000(H3N2))] gb|ABJ16793.1| polymerase PB1 [Influenza A virus (A/South Australia/74/2000(H3N2))] gb|ABK40069.1| polymerase PB1 [Influenza A virus (A/South Australia/52/2000(H3N2))] gb|ABK40083.1| polymerase PB1 [Influenza A virus (A/South Australia/76/2000(H3N2))] gb|ABK40620.1| polymerase PB1 [Influenza A virus (A/Queensland/1/2000(H3N2))] gb|ABK40686.1| polymerase PB1 [Influenza A virus (A/New York/704/1994(H3N2))] gb|ABK40708.1| polymerase PB1 [Influenza A virus (A/Western Australia/1/2000(H3N2))] gb|ABK40719.1| polymerase PB1 [Influenza A virus (A/Western Australia/5/2000(H3N2))] gb|ABK40730.1| polymerase PB1 [Influenza A virus (A/Western Australia/7/2000(H3N2))] gb|ABK79989.1| polymerase PB1 [Influenza A virus (A/South Australia/75/2000(H3N2))] gb|ABK80000.1| polymerase PB1 [Influenza A virus (A/South Australia/77/2000(H3N2))] gb|ABK80099.1| polymerase PB1 [Influenza A virus (A/Queensland/8/2000(H3N2))] gb|ABK80110.1| polymerase PB1 [Influenza A virus (A/Queensland/9/2000(H3N2))] gb|ABL67184.1| polymerase PB1 [Influenza A virus (A/South Australia/2/2000(H3N2))] gb|ABO32759.1| polymerase PB1 [Influenza A virus (A/South Australia/49/2000(H3N2))] gb|ABO32770.1| polymerase PB1 [Influenza A virus (A/South Australia/80/2000(H3N2))] gb|ABO33066.1| polymerase PB1 [Influenza A virus (A/South Australia/15/2000(H3N2))] gb|ABQ01341.1| polymerase PB1 [Influenza A virus (A/South Australia/16/2000(H3N2))] gb|ABQ01352.1| polymerase PB1 [Influenza A virus (A/South Australia/47/2000(H3N2))] gb|ABQ44391.1| polymerase PB1 [Influenza A virus (A/South Australia/73/2000(H3N2))] gb|ABR28523.1| polymerase PB1 [Influenza A virus (A/Western Australia/4/2000(H3N2))] gb|ABR28798.1| polymerase PB1 [Influenza A virus (A/Auckland/588/2000(H3N2))] gb|ABS49973.1| polymerase PB1 [Influenza A virus (A/Auckland/589/2000(H3N2))] gb|ABS50039.1| polymerase PB1 [Influenza A virus (A/Auckland/601/2000(H3N2))] gb|ACF54562.1| polymerase PB1 [Influenza A virus (A/Panama/2007/1999(H3N2))] gb|ACJ67530.1| polymerase PB1 [Influenza A virus (A/ferret/Maryland/P10-UMD/2008(H9N2))] gb|ACL12137.1| polymerase PB1 [Influenza A virus (A/Shangdong/9/1993(H3N2))] gb|ACO95267.1| polymerase PB1 [Influenza A virus (A/Sydney/5/1997(H3N2))] Length=757

Score = 1571 bits (4068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACD65217.1| polymerase PB1 [Influenza A virus (A/swine/Ohio/24366/07(H1N1))] gb|ACH69550.1| polymerase PB1 [Influenza A virus (A/swine/OH/511445/2007(H1N1))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABP49434.1| polymerase PB1 [Influenza A virus (A/South Australia/81/2000(H3N2))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMA+QLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMAIQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80389.1| polymerase PB1 [Influenza A virus (A/New York/775/1993(H3N2))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRN+HIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNIHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80169.1| polymerase PB1 [Influenza A virus (A/New York/749/1994(H3N2))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSG+PVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGIPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD94874.1| polymerase PB1 [Influenza A virus (A/New York/582/1996(H3N2))] gb|ABG37139.1| polymerase PB1 [Influenza A virus (A/New York/571/1996(H3N2))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSC+ETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCIETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAL87924.1|AF455726_1 polymerase subunit [Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2))] Length=757

Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS+KGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSQKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAM+TYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMVTYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADM IGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMKIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABS50017.1| polymerase PB1 [Influenza A virus (A/Auckland/599/2000(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GL+VSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLMVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABJ09357.1| polymerase PB1 [Influenza A virus (A/New South Wales/34/2000(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLG+KKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGKKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG88385.1| polymerase PB1 [Influenza A virus (A/New York/686/1995(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCH+GDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHKGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80103.1| polymerase PB1 [Influenza A virus (A/New York/710/1994(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80004.1| polymerase PB1 [Influenza A virus (A/New York/664/1995(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPSHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABF18011.1| polymerase subunit PB1 [Influenza A virus (A/swine/Manitoba/12707/2005(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK LWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKSLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG48288.1| polymerase PB1 [Influenza A virus (A/New York/756/1993(H3N2))] gb|ABG48365.1| polymerase PB1 [Influenza A virus (A/New York/764/1993(H3N2))] gb|ABG88759.1| polymerase PB1 [Influenza A virus (A/New York/781/1993(H3N2))] gb|ABI21274.1| polymerase PB1 [Influenza A virus (A/New York/768/1993(H3N2))] gb|ABI21483.1| polymerase PB1 [Influenza A virus (A/New York/801/1993(H3N2))] gb|ABI21494.1| polymerase PB1 [Influenza A virus (A/New York/802/1993(H3N2))] gb|ABI21505.1| polymerase PB1 [Influenza A virus (A/New York/803/1993(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKTGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG47991.1| polymerase PB1 [Influenza A virus (A/New York/720/1994(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+S+NNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESINNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG47892.1| polymerase PB1 [Influenza A virus (A/New York/685/1995(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESAD+SIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADISIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG26887.1| polymerase PB1 [Influenza A virus (A/New York/697/1995(H3N2))] gb|ABG37348.1| polymerase PB1 [Influenza A virus (A/New York/693/1995(H3N2))] gb|ABG67198.1| polymerase PB1 [Influenza A virus (A/New York/677/1995(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDV+ESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVIESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABE14510.1| polymerase PB1 [Influenza A virus (A/New York/634/1995(H3N2))] gb|ABG67675.1| polymerase PB1 [Influenza A virus (A/New York/639/1995(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKSGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY64350.1| polymerase PB1 [Influenza A virus (A/New York/264/1999(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPG+FENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGLFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAL87926.1|AF455728_1 polymerase subunit [Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS+KGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSKKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFE TSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFELTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSI+NTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSIINTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD15677.1| polymerase PB1 [Influenza A virus (A/Canterbury/101/2000(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLL+DGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLLDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80522.1| polymerase PB1 [Influenza A virus (A/New York/524/1997(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPE+NEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEBNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB77861.1| polymerase PB1 [Influenza A virus (A/New York/503/1997(H3N2))] gb|ABB77872.1| polymerase PB1 [Influenza A virus (A/New York/508/1997(H3N2))] gb|ABB79724.1| polymerase PB1 [Influenza A virus (A/New York/515/1997(H3N2))] 15 more sequence titles gb|ABB80089.1| polymerase PB1 [Influenza A virus (A/New York/512/1998(H3N2))] gb|ABB80167.1| polymerase PB1 [Influenza A virus (A/New York/509/1997(H3N2))] gb|ABB80204.1| polymerase PB1 [Influenza A virus (A/New York/519/1998(H3N2))] gb|ABB80248.1| polymerase PB1 [Influenza A virus (A/New York/534/1998(H3N2))] gb|ABB80511.1| polymerase PB1 [Influenza A virus (A/New York/523/1998(H3N2))] gb|ABB80543.1| polymerase PB1 [Influenza A virus (A/New York/531/1998(H3N2))] gb|ABB80690.1| polymerase PB1 [Influenza A virus (A/New York/542/1998(H3N2))] gb|ABB80701.1| polymerase PB1 [Influenza A virus (A/New York/543/1998(H3N2))] gb|ABC50175.1| polymerase PB1 [Influenza A virus (A/New York/510/1998(H3N2))] gb|ABC50186.1| polymerase PB1 [Influenza A virus (A/New York/511/1997(H3N2))] gb|ABC67584.1| polymerase PB1 [Influenza A virus (A/New York/526/1997(H3N2))] gb|ABD15545.1| polymerase PB1 [Influenza A virus (A/New York/544/1998(H3N2))] gb|ABD15556.1| polymerase PB1 [Influenza A virus (A/New York/549/1998(H3N2))] gb|ABD15578.1| polymerase PB1 [Influenza A virus (A/New York/530/1998(H3N2))] gb|ABD15600.1| polymerase PB1 [Influenza A virus (A/New York/514/1998(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY98327.1| polymerase PB1 [Influenza A virus (A/New York/323/1999(H3N2))] Length=757

Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEV+QQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVIQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACH58919.1| polymerase PB1 [Influenza A virus (A/swine/Minnesota/7209/2007(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRMNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK+LWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKRLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACE78120.1| polymerase PB1 [Influenza A virus (A/swine/Korea/CY07/2007(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRR+RDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRIRDNMTKKMVTQRTIGKKKQRVNKRNYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAE+LASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEVLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALI+NAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIINAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80092.1| polymerase PB1 [Influenza A virus (A/New York/707/1994(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQT+CVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTECVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG80026.1| polymerase PB1 [Influenza A virus (A/New York/667/1995(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEE RRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEEFRRQK  757

>gb|ABG26876.1| polymerase PB1 [Influenza A virus (A/New York/696/1994(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVE LARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVEILARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABE14060.1| polymerase PB1 [Influenza A virus (A/New York/625/1996(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKAPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABE13603.1| polymerase PB1 [Influenza A virus (A/New York/606/1995(H3N2))] gb|ABE14038.1| polymerase PB1 [Influenza A virus (A/New York/619/1996(H3N2))] gb|ABE14887.1| polymerase PB1 [Influenza A virus (A/New York/637/1996(H3N2))] gb|ABE15620.1| polymerase PB1 [Influenza A virus (A/New York/648/1995(H3N2))] gb|ABG47859.1| polymerase PB1 [Influenza A virus (A/New York/647/1995(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTR+D Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRMD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD94885.1| polymerase PB1 [Influenza A virus (A/New York/591/1996(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRI+KEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIEKEEFSEIMKICSTIEELRRQK  757

>gb|ABD77837.1| polymerase PB1 [Influenza A virus (A/New York/558/1997(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKL+GINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLMGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAX11643.1| polymerase PB1 [Influenza A virus (A/New York/110/2002(H3N2))] gb|AAX57672.1| polymerase PB1 [Influenza A virus (A/New York/109/2002(H3N2))] gb|ABA42343.1| polymerase PB1 [Influenza A virus (A/New York/403/2002(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAO15324.1|AF225520_1 polymerase basic 1 [Influenza A virus (A/sw/Shizuoka/119/97(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR++FESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIEFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80193.1| polymerase PB1 [Influenza A virus (A/New York/518/1998(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSC+ETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCIETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNM+NNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMVNNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80100.1| polymerase PB1 [Influenza A virus (A/New York/516/1997(H3N2))] Length=757

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 +RNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  VRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>emb|CAC84754.1| polymerase subunit 1 [Influenza A virus (swine/Finistere/127/99(H3N2))] Length=756

Score = 1570 bits (4065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/756 (98%), Positives = 754/756 (99%), Gaps = 0/756 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQ  756 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQ Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQ  756

>gb|ABY81661.2| polymerase PB1 [Influenza A virus (A/swine/Korea/JNS06/2004(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+ KRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVTKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYIN+TGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIG TVIKNNMINNDLG Sbjct 481  KSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGATVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABJ09247.1| polymerase PB1 [Influenza A virus (A/Western Australia/12/2000(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABI21406.1| polymerase PB1 [Influenza A virus (A/New York/791/1993(H3N2))] gb|ABI93069.1| polymerase PB1 [Influenza A virus (A/New South Wales/20/1999(H3N2))] gb|ABJ09324.1| polymerase PB1 [Influenza A virus (A/New South Wales/21/1999(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE FFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFENFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG47958.1| polymerase PB1 [Influenza A virus (A/New York/715/1994(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPN YN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNSYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG48332.1| polymerase PB1 [Influenza A virus (A/New York/761/1993(H3N2))] gb|ABG80356.1| polymerase PB1 [Influenza A virus (A/New York/767/1993(H3N2))] gb|ABI21373.1| polymerase PB1 [Influenza A virus (A/New York/788/1993(H3N2))] gb|ABI21384.1| polymerase PB1 [Influenza A virus (A/New York/789/1993(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE+FFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFERFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD79175.1| polymerase PB1 [Influenza A virus (A/New York/579/1997(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRG+LEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGVLEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD79131.1| polymerase PB1 [Influenza A virus (A/New York/560/1997(H3N2))] gb|ABD79142.1| polymerase PB1 [Influenza A virus (A/New York/564/1997(H3N2))] gb|ABD79153.1| polymerase PB1 [Influenza A virus (A/New York/565/1996(H3N2))] 8 more sequence titles gb|ABD79164.1| polymerase PB1 [Influenza A virus (A/New York/575/1996(H3N2))] gb|ABD79186.1| polymerase PB1 [Influenza A virus (A/New York/583/1997(H3N2))] gb|ABD79197.1| polymerase PB1 [Influenza A virus (A/New York/566/1997(H3N2))] gb|ABD79208.1| polymerase PB1 [Influenza A virus (A/New York/574/1996(H3N2))] gb|ABD79230.1| polymerase PB1 [Influenza A virus (A/New York/581/1997(H3N2))] gb|ABD79241.1| polymerase PB1 [Influenza A virus (A/New York/587/1996(H3N2))] gb|ABD94907.1| polymerase PB1 [Influenza A virus (A/New York/594/1996(H3N2))] gb|ABE13126.1| polymerase PB1 [Influenza A virus (A/New York/572/1996(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY64250.1| polymerase PB1 [Influenza A virus (A/New York/253/1999(H3N2))] gb|AAY98115.1| polymerase PB1 [Influenza A virus (A/New York/280/1999(H3N2))] gb|AAY98235.1| polymerase PB1 [Influenza A virus (A/New York/320/1999(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEEL+RQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELKRQK  757

>gb|AAX47533.1| polymerase PB1 [Influenza A virus (A/New York/96/2002(H3N2))] Length=758

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD15644.1| polymerase PB1 [Influenza A virus (A/New York/550/1998(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKL+RRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLRRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABC59715.1| polymerase PB1 [Influenza A virus (A/turkey/Ohio/313053/04(H3N2))] gb|ACD88667.1| polymerase PB1 [Influenza A virus (A/turkey/OH/313053/2004(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK+LWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKRLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABC02296.1| polymerase PB1 [Influenza A virus (A/New York/527/1998(H3N2))] gb|ABG88737.1| polymerase PB1 [Influenza A virus (A/New York/754/1993(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT++QPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKSQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB96539.1| polymerase PB1 [Influenza A virus (A/New York/535/1998(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIK+EEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKREEFSEIMKICSTIEELRRQK  757

>gb|AAZ43413.1| polymerase PB1 [Influenza A virus (A/Memphis/59/99(H3N2))] gb|ABU80328.1| polymerase PB1 [Influenza A virus (A/Auckland/598/2000(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY98404.1| polymerase PB1 [Influenza A virus (A/New York/338/1999(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIK+NMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKSNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAX76751.1| polymerase PB1 [Influenza A virus (A/New York/194/2003(H3N2))] gb|AAY47083.1| polymerase PB1 [Influenza A virus (A/New York/195/2003(H3N2))] gb|ABI92739.1| polymerase PB1 [Influenza A virus (A/Western Australia/45/2003(H3N2))] Length=757

Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACO36361.1| polymerase PB1 [Influenza A virus (A/Siena/3/1995(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVM+SM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMKSMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACK99484.1| polymerase PB1 [Influenza A virus (A/Siena/1/1997(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNH+GIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHDGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABS50006.1| polymerase PB1 [Influenza A virus (A/Auckland/596/2000(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEK+RPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKVRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIE+LRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEKLRRQK  757

>gb|ABJ09269.1| polymerase PB1 [Influenza A virus (A/New South Wales/5/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIE+LRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEDLRRQK  757

>gb|ABI20944.1| polymerase PB1 [Influenza A virus (A/New York/743/1994(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KE+IE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEKIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG88781.1| polymerase PB1 [Influenza A virus (A/New York/783/1993(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVI+NNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIRNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE+FFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFERFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG88748.1| polymerase PB1 [Influenza A virus (A/New York/755/1993(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMT KMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTNKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRN+HIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNIHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABG26865.1| polymerase PB1 [Influenza A virus (A/New York/695/1995(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKTGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARID R+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDVRIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABF21245.1| polymerase PB1 [Influenza A virus (A/Panama/2007/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRG+LCNPLNPFVSHKE++SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGKLCNPLNPFVSHKELESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD94940.1| polymerase PB1 [Influenza A virus (A/New York/600/1996(H3N2))] gb|ABF82703.1| polymerase PB1 [Influenza A virus (A/New York/599/1996(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD94830.1| polymerase PB1 [Influenza A virus (A/New York/536/1998(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASI+LKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASINLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD77694.1| polymerase PB1 [Influenza A virus (A/New York/569/1997(H3N2))] gb|ABD94929.1| polymerase PB1 [Influenza A virus (A/New York/596/1996(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMES++KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESIDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD77617.1| polymerase PB1 [Influenza A virus (A/Canterbury/10/2001(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEW RNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWLRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY46444.1| polymerase PB1 [Influenza A virus (A/New York/250/1998(H3N2))] gb|AAY64410.1| polymerase PB1 [Influenza A virus (A/New York/287/1998(H3N2))] gb|AAZ38481.1| polymerase PB1 [Influenza A virus (A/New York/324/1999(H3N2))] gb|ABB02955.1| polymerase PB1 [Influenza A virus (A/New York/448/1998(H3N2))] gb|ABI20955.1| polymerase PB1 [Influenza A virus (A/New York/744/1994(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLET+EVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETIEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAX57822.1| polymerase PB1 [Influenza A virus (A/New York/167/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQS+ GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSRAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY18174.1| polymerase PB1 [Influenza A virus (A/New York/138/1999(H3N2))] gb|AAY28283.1| polymerase PB1 [Influenza A virus (A/New York/137/1999(H3N2))] gb|AAY44763.1| polymerase PB1 [Influenza A virus (A/New York/145/1999(H3N2))] gb|ABB05202.1| polymerase PB1 [Influenza A virus (A/New York/423/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVV+PAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVVPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAM78509.1|AF483601_1 polymerase complex subunit PB1 [Influenza A virus (A/Paris/908/97(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+K+EIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKDEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAL87922.1|AF455724_1 polymerase subunit [Influenza A virus (A/Swine/North Carolina/98225/01(H1N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+ K+GYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVTKKGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVV PAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVTPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD61334.1| polymerase PB1 [Influenza A virus (A/Canterbury/96/2000(H3N2))] gb|ABE12114.1| polymerase PB1 [Influenza A virus (A/Canterbury/92/2000(H3N2))] gb|ABG79949.1| polymerase PB1 [Influenza A virus (A/Canterbury/97/2000(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYT+DTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTIDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABD15655.1| polymerase PB1 [Influenza A virus (A/Canterbury/90/2000(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQ+TRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQKTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABC40616.1| polymerase PB1 [Influenza A virus (A/New York/460/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKK+TKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKHTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80756.1| polymerase PB1 [Influenza A virus (A/New York/525/1998(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKI+KIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIKKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ABB80721.1| polymerase PB1 [Influenza A virus (A/New York/547/1997(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMA+LGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMAKLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|AAY98125.1| polymerase PB1 [Influenza A virus (A/New York/282/1999(H3N2))] Length=757

Score = 1569 bits (4063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNL+N Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLHN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACH58913.1| polymerase PB1 [Influenza A virus (A/swine/Minnesota/578/2007(H3N2))] Length=757

Score = 1569 bits (4062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK LWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKSLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACI26579.1| polymerase PB1 [Influenza A virus (A/Siena/10/1990(H3N2))] Length=757

Score = 1569 bits (4062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DY+GRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757

>gb|ACE78116.1| polymerase PB1 [Influenza A virus (A/swine/Korea/CY04/2007(H3N2))] gb|ACE78118.1| polymerase PB1 [Influenza A virus (A/swine/Korea/CY05/2007(H3N2))] Length=757

Score = 1569 bits (4062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query 1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60 MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE Sbjct 1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120 TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD Sbjct 61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180 KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE Sbjct 121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240 ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA Sbjct 181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query 241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300 IATPGMQIRGFVYFVE LARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF Sbjct 241  IATPGMQIRGFVYFVEILARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360 TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK Sbjct 301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query 361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420 +MK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG Sbjct 361  KMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query 421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480 VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK Sbjct 421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540 KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG Sbjct 481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600 PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN Sbjct 541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query 601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660 IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV Sbjct 601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720 ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS Sbjct 661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query 721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757 RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK Sbjct 721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757